nanopore sequencing | GenomeWeb

nanopore sequencing

Two research groups reported on statistical methods for uncovering methylated cytosine and/or adenine bases using electrical current cues from Oxford Nanopore sequencers.

In Nucleic Acids Research this week: nanopore sequencing workflow to detect antibiotic resistance in gut microbes, TSSPlant tool, and more.

The researchers noted that the results "highlight the great potential of nanopore sequencing to analyze broad microbial community trends."

The UCSC spinout plans to launch a handheld nanopore sensor this year and will partner with diagnostic and other companies to develop assays.

It was a rough year for biotech stocks — the Nasdaq Biotech Index fell 22 percent even as the Dow gained 13 percent and the Nasdaq gained 8 percent.

The university claims that Genia's patents are based on technology that was developed by UCSC researchers and that UCSC should have ownership of them.

The company plans to use the new funding to expand into Asia, with a particular focus on China.

The researchers said that although improvements are needed for accurate basecalling, the MinIon is suitable for structural variant identification and haplotype phasing. 

The assembly of the agricultural pest Rhizoctonia solani genome was more contiguous and larger than previous short-read assemblies.

The material has a similar benefit to graphene, in that it is one-atom thin, but has the benefit that DNA does not stick to it as it translocates through the pore. 

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In Science this week: genetic target for urothelial bladder cancer treatment, and more.

At the Conversation, the University of Oxford's Michael Macklay writes that learning genetic risk of disease is a personal decision.

Two dozen scientific organizations have endorsed the March for Science, according to ScienceInsider.

Researchers in Japan describe a chimpanzee with a chromosomal abnormality similar to human Down syndrome, Mashable reports.