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Genome Research Papers on IPAFinder, Structural Variant Expression Effects, Single-Cell RNA-Seq Markers

In Genome Research this week: IPAFinder method to detect intronic polyadenylation, influence of structural variants on gene expression, and more.

Speedy Long-Read Genome Assembly Enabled by Minimizer-Space Analysis

The minimizer-space de Bruijn graph approach could assemble a human genome in less than 10 minutes using eight cores and 10 gigabytes of random access memory.

CSIRO Develops Software to Detect Foreign DNA Without Reference Genomes
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The INSIDER algorithm, which grew out of SARS-CoV-2 variant research, looks for shifts in k-mer signatures to streamline the search for novel genomic patterns.

Nature Papers Present Smartphone Platform for DNA Diagnosis of Malaria, Mouse Lines for Epigenomic Editing

In Nature this week: a low-cost tool to detect infectious diseases like malaria, and more.

Sequencing-Based Assessment of CYP2D6 Could Improve Prediction of Drug Response
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Researchers have developed a computational method that considers uncommon CYP2D6 variants to assess patient-specific metabolism of tamoxifen and other drugs.

Jun 29, 2021

New Single-Cell Algorithm Finds Gene Panels Used to ID Rare Cells
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Jun 17, 2021

Nucleome Therapeutics Looks to Use Single-Base-Pair Genome Mapping Method for Drug Discovery
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May 28, 2021

Tool Detects Pediatric Bone Tumors From Liquid Biopsies Based on Epigenetic Profiles

May 26, 2021

Bioinformatics Method Could Improve Detection of Off-Target CRISPR Activity
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May 21, 2021

Macrophage Subpopulation May Predict Kidney Cancer Recurrence, Serve as Drug Target

Apr 30, 2021

Transcriptomic Algorithm Shows Ability to Predict Progression-Free Survival in Cancer Patients
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Apr 19, 2021

Korean Rare Disease Diagnostics Firm 3billion Looks to 2022 IPO, Expansion Into Drug Discovery
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Apr 8, 2021

Long-Read Genome Assemblies Have 'Blind Spots' for Structural Variant Detection
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Mar 19, 2021

Allelica Wants Polygenic Risk Scores to Become Routine in Heart Disease Care
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Mar 17, 2021

Genomics Plc Looks to Grow 'Genomic Prevention' With Polygenic Risk Scores
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Mar 2, 2021

PreludeDx DCIS Breast Cancer Test Helps Determine Radiation Therapy Benefits, Reduce Overtreatment
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Feb 9, 2021

European Project Sets Out to Harness Genomics Data, AI to Create New Predictive Tools
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Jan 13, 2021

Autism Spectrum Disorder Study Finds Contribution From De Novo Tandem Repeat Mutations

Dec 11, 2020

Cold Spring Harbor Lab Develops iPhone App for Mobile Sequencing Analysis
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Dec 3, 2020

Illumina, New York Healthcare Providers, NYGC Partner on Clinical Whole-Genome Sequencing

Oct 28, 2020

Illumina's ExpansionHunter Software Shows Clinical Promise for STR Expansions
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Oct 16, 2020

Imec Adds Variant Calling to DNA Analytics Software to Accelerate Genome Analysis
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Oct 7, 2020

Nvidia Expands Genomics Activities With Supercomputer, New Partnerships
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Oct 6, 2020

Startup Coral Genomics Wins $2M SBIR Grant From NIH

Oct 1, 2020

Algorithm Uncovers New Complex Rearrangement Classes in Cancer Genomes

Breaking News
The Scan

US Booster Eligibility Decision

The US CDC director recommends that people at high risk of developing COVID-19 due to their jobs also be eligible for COVID-19 boosters, in addition to those 65 years old and older or with underlying medical conditions.

Arizona Bill Before Judge

The Arizona Daily Star reports that a judge weighing whether a new Arizona law restricting abortion due to genetic conditions is a ban or a restriction.

Additional Genes

Wales is rolling out new genetic testing service for cancer patients, according to BBC News.

Science Papers Examine State of Human Genomic Research, Single-Cell Protein Quantification

In Science this week: a number of editorials and policy reports discuss advances in human genomic research, and more.