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PLOS One. 2013 Nov 13;8(11):e79120.
Genome-wide chromatin analysis in mature mouse and human spermatozoa.
Hisano M, Erkek S, Dessus-Babus S, Ramos L, et al.
Nat Protoc. 2013 Dec;8(12):2449-70.
featureCounts: an efficient general-purpose program for assigning sequence reads to genomic features.
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Bioinformatics. 2013 Nov 13. [Epub ahead of print]
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Bioinformatics. 2013 Nov 13. [Epub ahead of print]
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BMC Genomics. 2013 Nov 14;14(1):788.
Efficient cellular fractionation improves RNA sequencing analysis of mature and nascent transcripts from human tissues.
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BMC Biotechnol. 2013 Nov 13;13(1):99.
Towards sensitive graphene nanoribbon-nanopore devices by preventing electron beam induced damage.
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ACS Nano. 2013 Nov 13. [Epub ahead of print]
Prospective identification of parasitic sequences in phage display screens.
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Nucleic Acids Res. 2013 Nov 11. [Epub ahead of print]
Microsatellite marker discovery using single molecule real-time circular consensus sequencing on the Pacific Biosciences RS.
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Biotechniques. 2013 Nov;55(5):253-6.
Finding the active genes in deep RNA-seq gene expression studies.
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BMC Genomics. 2013 Nov 11;14(1):778.
RNAseqViewer: visualization tool for RNA-seq data.
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Bioinformatics. 2013 Nov 8. [Epub ahead of print]
Rapid detection of expanded short tandem repeats in personal genomics using hybrid sequencing.
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Bioinformatics. 2013 Nov 8. [Epub ahead of print]
DriverDB: an exome sequencing database for cancer driver gene identification.
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Nucleic Acids Res. 2013 Nov 7. [Epub ahead of print]
High-resolution microbial community reconstruction by integrating short reads from multiple 16S rRNA regions.
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Nucleic Acids Res. 2013 Nov 7. [Epub ahead of print]
Massively parallel polymerase cloning and genome sequencing of single cells using nanoliter microwells.
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Nat Biotechnol. 2013 Nov 10. [Epub ahead of print]
(See our coverage of this paper here.)
Chromatin connectivity maps reveal dynamic promoter-enhancer long-range associations.
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Nature. 2013 Nov 10. [Epub ahead of print]
IgG variable region and VH CDR3 diversity in unimmunized mice analyzed by massively parallel sequencing.
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Mol Immunol. 2013 Nov 7;57(2):274-283.
Performance of common analysis methods for detecting low-frequency single nucleotide variants in targeted next-generation sequence data.
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J Mol Diagn. 2013 Nov 5. pii: S1525-1578(13)00210-9. [Epub ahead of print]
Accurate local-ancestry inference in exome-sequenced admixed individuals via off-target sequence reads.
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Am J Hum Genet. 2013 Nov 7;93(5):891-9.
BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data.
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BMC Genomics. 2013 Nov 10;14(1):774.