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Nature Papers Find Variants Behind Childhood ALS, Present Approach to Introduce Variation into Wheat Genome

By sequencing the genomes of 11 individuals with a severe form of childhood amyotrophic lateral sclerosis (ALS), a team led by National Institutes of Health researchers has identified a set of rare mutations that cause the disease. In these patients, they discovered variants in the gene SPTLC1, which is involved in lipid metabolism, and found that these mutations disrupt the production of an enzyme called serine palmitoyltransferase (SPT), leading to unrestrained sphingolipid production and accumulation in the motor neurons affected in ALS. "Alterations in SPT activity have been linked to neurodegeneration, the study's authors write this week in Nature Medicine. "Nevertheless, no human disease has been linked to SPT overactivity." The study's authors also developed small interfering RNAs that target the ALS-causing SPTLC1 allele for degradation while leaving the normal allele intact and normalize sphingolipid levels in vitro as a proof-of-concept for a precision medicine approach for treating this form of ALS.

Genetic variation is commonly used to improve crop yield and quality, but hexaploid wheat — one of the world's most important crop plants — remains intractable to selective breeding given the narrow diversity of its genome. To address this, a group led by Henan University scientists developed an approach that takes advantage of the genomic variations in the grass species Aegilops tauschii. As described in Nature Plants last week, they developed a platform to rapidly introduce genetic variations from A. tauschii into wheat through a combination of introgression technology, speed breeding, and high-throughput genotyping and phenotyping. The investigators assembled four new reference genomes and resequenced 278 accessions of A. tauschii, revealing "extensive untapped variations" in the plant and introduce improvements in preharvest sprouting resistance and grain weight of new wheat lines.

The Scan

ChatGPT Does As Well As Humans Answering Genetics Questions, Study Finds

Researchers in the European Journal of Human Genetics had ChatGPT answer genetics-related questions, finding it was about 68 percent accurate, but sometimes gave different answers to the same question.

Sequencing Analysis Examines Gene Regulatory Networks of Honeybee Soldier, Forager Brains

Researchers in Nature Ecology & Evolution find gene regulatory network differences between soldiers and foragers, suggesting bees can take on either role.

Analysis of Ashkenazi Jewish Cohort Uncovers New Genetic Loci Linked to Alzheimer's Disease

The study in Alzheimer's & Dementia highlighted known genes, but also novel ones with biological ties to Alzheimer's disease.

Tara Pacific Expedition Project Team Finds High Diversity Within Coral Reef Microbiome

In papers appearing in Nature Communications and elsewhere, the team reports on findings from the two-year excursion examining coral reefs.