Skip to main content
Premium Trial:

Request an Annual Quote

Circadian Rhythm Clues Garnered From Metabolomics-Based Machine Learning

In a paper appearing in the Proceedings of the National Academy of Sciences, researchers at the University of Manchester and other centers in the UK turn to blood plasma metabolomics and machine learning to predict a circadian rhythm measurement known as "dim light melatonin onset" (DLMO) in dozens of male and female participants. Using a partial least squares regression machine learning method, the team attempted to estimate DLMO based on targeted metabolomic profiling of 131 compounds in the blood at sampling points every two hours. In parallel, participants' hormone levels were measured hourly. The results suggest the targeted metabolomics machine learning method compared favorably to existing circadian rhythm estimates when tweaked to take sex-specific metabolites into account. More than half of metabolites used for DLMO prediction were informative in both male and female participants, while around one-third were male-specific and roughly 15 percent were female-specific. "Although estimation of circadian body time using blood-targeted metabolomics requires further validation in shift work and other real-world conditions," the authors write, "it currently may offer a robust, feasible technique with relatively high accuracy to aid personalized optimization of behavior and clinical treatment after appropriate validation in patient populations."

 

 

The Scan

ChatGPT Does As Well As Humans Answering Genetics Questions, Study Finds

Researchers in the European Journal of Human Genetics had ChatGPT answer genetics-related questions, finding it was about 68 percent accurate, but sometimes gave different answers to the same question.

Sequencing Analysis Examines Gene Regulatory Networks of Honeybee Soldier, Forager Brains

Researchers in Nature Ecology & Evolution find gene regulatory network differences between soldiers and foragers, suggesting bees can take on either role.

Analysis of Ashkenazi Jewish Cohort Uncovers New Genetic Loci Linked to Alzheimer's Disease

The study in Alzheimer's & Dementia highlighted known genes, but also novel ones with biological ties to Alzheimer's disease.

Tara Pacific Expedition Project Team Finds High Diversity Within Coral Reef Microbiome

In papers appearing in Nature Communications and elsewhere, the team reports on findings from the two-year excursion examining coral reefs.