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Papers of Note: Oct 8, 2009

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RNAi-Related Papers Published September 2009

Pyrosequencing of Small Non-Coding RNAs in HIV-1-Infected Cells: Evidence for the Processing of a Viral-Cellular Double-Stranded RNA Hybrid

Nucleic Acids Research, Sept. 3, 2009; epub ahead of print
Jeang et al.


Inhibition of Hepatitis B Virus Replication with Linear DNA Sequences Expression Antiviral microRNA Shuttles

Biochemical and Biophysical Research Communications, Sept. 4, 2009; epub ahead of print
Arbuthnot et al.


A High-Throughput Experimental Approach to Identify miRNA Targets in Human Cells

Nucleic Acids Research, Sept. 4, 2009; epub ahead of print
van den Berg et al.


Active Turnover Modulates Mature microRNA Activity in Caenorhabditis elegans

Nature, Sept. 6, 2009; epub ahead of print
Chatterjee & Grosshans


Plasma microRNAs as Diagnostically Sensitive and Specific Biomarkers of Tissue Injury

Clinical Chemistry, Sept. 10, 2009; epub ahead of print
Glaab et al.


RNAi in Budding Yeast

Science, Sept. 10, 2009; epub ahead of print
Bartel et al.


The Non-Coding RNA of the Multidrug Resistance-Linked Vault Particle Encodes Multiple Regulatory Small RNAs

Nature Cell Biology, Sept. 13, 2009; epub ahead of print
Rovira et al.


The Relationship Between the Evolution of microRNA Targets and the Length of Their UTRs

BMC Genomics, Sept. 14, 2009; epub ahead of print
Gerstein et al.


Acceleration of Muscle Regeneration by Local Injection of Muscle-Specific microRNAs in Rat Skeletal Muscle-Injury Model

Journal of Cellular and Molecular Medicine, Sept. 14, 2009; epub ahead of print
Ochi et al.


microRNA Dynamics in the Stages of Tumorigenesis Correlate with Hallmark Capabilities of Cancer

Genes & Development, Sept. 15, 2009; 23: 18, 2152-2165
Hanahan et al.


The 5'-End Heterogeneity of Adenovirus Virus-Associated RNAi Contributes to the Asymmetric Guide Strand Incorporation into the RNA-Induced Silencing Complex

Nucleic Acids Research, Sept. 15, 2009; epub ahead of print
Akusjarvi et al.


microRNAs Resolve an Apparent Conflict Between Annelid Systematics and Their Fossil Record

Proceedings of the National Academy of Sciences, Sept. 15, 2009; epub ahead of print
Peterson et al.


A Lentiviral Vector Encoding Two Fluorescent Proteins Enables Imaging of Adenoviral Infection Via Adenovirus-Encoded miRNAs in Single Living Cells

Journal of Biochemistry, Sept. 16, 2009; epub ahead of print
Inoue et al.


Requirement for ERI/Dicer Complex in Endogenous RNAi and Sperm Development in Caenorhabditis elegans

Genetics, Sept. 21, 2009; epub ahead of print
Kennedy et al.


RNA Interference in Schistosomes: Machinery and Methodology

Parasitology, Sept. 21, 2009; epub ahead of print
Skelly et al.


An Advanced Blue-White Screening Method for Construction of shRNA-Expression Vectors

Biochemical and Biophysical Research Communications, Sept. 23, 2009; epub ahead of print
Ma et al.


Adenosine Deamination in Human Transcripts Generates Novel microRNA Binding Sites

Human Molecular Genetics, Sept. 23, 2009; epub ahead of print
Davidson et al.


Combined Proteomic-RNAi Screen for Host Factors Involved in Human Hepatitis Delta Virus Replication

RNA, Sept. 23, 2009; epub ahead of print
Kay et al.


Down-Regulation of Dicer Expression in Ovarian Cancer Tissues

Clinical Biochemistry, Sept. 24, 2009; epub ahead of print
Sotiropoulou et al.


Culture of Drosophila Primary Cells Dissociated from Gastrula Embryos and Their Use in RNAi Screening

Nature Protocols, Sept. 24, 2009; epub ahead of print
Perrimon et al.


microRNA miR-346 Targets the 5' UTR of RIP140 mRNA and Up-Regulates its Protein Expression

Biochemical Journal, Sept. 25, 2009; epub ahead of print
Wei et al.


Statistical Use of Argonaute Expression and RISC Assembly in microRNA Target Identification

PLoS Computational Biology, Sept. 25, 2009; epub ahead of print
Newton et al.


Conserved Expression Patterns Predict microRNA Targets

PLoS Computational Biology, Sept. 25, 2009; epub ahead of print
Rasko et al.


Single-Tube, High-Throughput Cloning of Inverted-Repeat Constructs for Double-Stranded RNA Expression

PLoS One, Sept. 28, 2009; 4: 9, e7205
Dong et al.


Ago2 Immunoprecipitation Identifies Predicted microRNAs in Human Embryonic Stem Cells and Neural Precursors

PLoS One, Sept. 28, 2009; 4: 9, e7192
Hart et al.


In Vivo Delivery of a microRNA-Regulated Transgene Induces Antigen-Specific Regulatory T Cells and Promotes Immunological Tolerance

Blood, Sept. 30, 2009; epub ahead of print
Roncarolo et al.


Design of RNAi Hairpins for Mutation-Specific Silencing of Ataxin-7 and Correction of a SCA7 Phenotype

PLoS One, Sept. 30, 2009; 4: 9, e7232
Wood et al.

The Scan

Dropped Charges

The US Justice Department has dropped visa fraud charges against five Chinese researchers, according to the Wall Street Journal.

More Kids

The Associated Press says Moderna is expanding its SARS-CoV-2 vaccine study to included additional children and may include even younger children.

PNAS Papers on Rat Clues to Human Migration, Thyroid Cancer, PolyG-DS

In PNAS this week: ancient rat genome analysis gives hints to human migrations, WDR77 gene mutations in thyroid cancer, and more.

Purnell Choppin Dies

Purnell Choppin, a virologist who led the Howard Hughes Medical Institute, has died at 91, according to the Washington Post.