The Simons Foundation in New York City is seeking a Senior Bioinformatics Engineer to develop and support whole exome sequencing and genome sequencing data analysis pipelines in both research and operational modalities. This position will report to the director of data and analytics in the informatics group and will work with other engineers and analysts in the informatics group, as well as with clinical and basic research teams at the foundation.
Main Functions and Responsibilities
- Design, develop and operate computational pipelines for next generation sequencing data.
- Work on both large-scale projects and small custom tasks that span a wide variety of analysis problems
- Develop new and/or improve upon existing algorithms for variant detection (SNPs and indels) and structural variant detection (CNVs, inversions and translocations) for clinical research purposes.
- Develop and maintain a knowledge base of variants and annotations discovered in processing of samples
The Simons Foundation is an Equal Opportunity Employer, M/F/D/V.