Computational Biologist Postdoctoral Fellow (Metagenome Genomics)

Lawrence Berkeley National Laboratory
Job Location
Berkeley, CA
Job Description

Computational Biologist Postdoctoral Fellow (Metagenome Genomics) - 80207
Organization: GN-Genomics

The Department of Energy Joint Genome Institute - DOE JGI (a division of the Lawrence Berkeley National Laboratory) has an exciting Postdoctoral Research opportunity available for a Computational Biologist Postdoc. Under general supervision, you will work as part of the Metagenome program and focus on the analysis of microbial community data generated with new sequencing technologies and methods, including functionally targeted metagenome data and Pacific Biosciences sequence. Responsibilities include planning sequencing projects, sample collection, environmental nucleic acid extraction, obtaining sequence data from internal or external sources and implementing, configuring, and running software for processing and analysis of such data. You will store and organize results for presentation and viewing by internal and external project team members and the wider scientific community and prepare results for publication in scientific journals. Position reports to Metagenome Program lead.

• Work with JGI staff and collaborators to obtain microbial community data including ribosomal tag sequences, shotgun metagenome sequence data, single cell whole-genome-shotgun sequence data, and metatranscriptome sequence data using Illumina, Pacific Biosciences and possibly other sequencing technologies.
• Employ internal and external software and web-based analysis tools for processing and analyzing collected data.
• Plan and execute microbial community research projects, potentially including field sampling, metadata collection and nucleic acid extraction.
• Store and organize results for presentation and viewing by JGI collaborators and the wider scientific community.
• Interact with internal and external collaborators to ensure efficient communication and completion of analysis projects.
• Document group analysis procedures and methods for reference.
• Write results up for publication.
• Present research at both internal and external forums.
• Preferred - Attend and present technical status reports at group meetings.

• Ph.D. in life sciences or computer science with some relevant research experience in both areas.
• Strong background in bioinformatics, molecular biology and genomics.
• Experience with: use of computational methods, databases of genomic information, and methods of analysis of biological sequence data especially next-generation sequence data.
• Experience using PC, Mac and/or UNIX operating systems.
• Strong organizational and record keeping skills to record experiment results and analyze data.
• Effective oral and written communication skills to present findings at group meetings and conferences and publish results.
• Ability to interact with a variety of technical and scientific personnel including Research Associates, Scientists and Software Engineers.
• Preferred - Proficient in computer programming.

Note: This is a 2-year appointment with the possibility of renewal based upon satisfactory job performance, continuing availability of funds, and ongoing operational needs. Work will be performed at the Lawrence Berkeley National Laboratory in Berkeley, CA. A background check is required.

About Us
Rapid technological advances in genomics have transformed modern biology. From its inception, the Department of Energy Joint Genome Institute has been at the forefront of large-scale sequence-based science. Learn more about the Metagenome Program at the JGI. Learn more about JGI happenings at and

Berkeley Lab understands the postdoctoral experience in a research environment is unique. We are committed to the growth and development of early career researchers in pursuit of becoming next generation scientists and engineers. Read about the excellent postdoctoral benefits at Berkeley Lab.

Lawrence Berkeley National Laboratory addresses the world’s most urgent scientific challenges by advancing sustainable energy, protecting human health, creating new materials, and revealing the origin and fate of the universe. Berkeley Lab’s science is a global enterprise. Our scientists work at the frontiers of knowledge to better understand our universe and to address the challenges facing our nation and our planet.

Berkeley Lab is an Equal Opportunity/Affirmative Action Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, national origin, disability, age or protected veteran status.

How to Apply

How To Apply
Apply directly online at and follow the on-line instructions to complete the application process.

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