Genomic Testing Cooperative GTC Interpret
Genomic Testing Cooperative has launched GTC Interpret, a web-based platform designed to provide member laboratories and partner labs with access to a comprehensive range of next-generation sequencing DNA and RNA data, including sequencing quality control, detected DNA and RNA variants, tumor mutation burden, microsatellite instability, homologous recombination deficiency, Epstein-Barr virus, human papillomavirus, and torque teno virus (TTV). Users can also access details on MET14, EGFRviii, and other genes, alternative splicing data, RNA fusions, chromosomal changes, gene copy numbers, HLA genotyping, RNA expression levels, B-cell (heavy and light chains) and T-cell clonality (T-cell receptors of alpha, beta, gamma, and delta genes) with their specific clonotype, the company said. The platform also gives access to BAM file images highlighting and comparing detected DNA and RNA variants allowing for a clear, visual confirmation of results, GTC added.