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Galileo LIMS 3.1, Taverna 1.3, Ensembl 34, RESID, AnnHyb, Shirley Tilghman

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Thermo Electron has released Galileo LIMS 3.1, which includes new functionality to support in vitro ADME/tox discovery laboratories. New features include automatic results flagging, rapid study entry, the addition of "IC50 shift" — a new experiment type to elucidate enzyme inactivation, and support for PAMPA permeability studies. Galileo also includes interfaces for Thermo's more analytical instruments, including a bi-directional digital interface to Xcalibur v 1.4 and 2.0, the controlling software for the company's line of mass spectrometers.


Taverna 1.3 is available at http://prdownloads.sourceforge.net/taverna/taverna-workbench-1.3.zip?download (Windows, Unix, Linux) and http://prdownloads.sourceforge.net/taverna/taverna-workbench-1.3.dmg?download (Mac OS X). The release includes improved user interface code, re-written integration with BioMoby integration, and bug fixes.


Ensembl 34 is available at http://www.ensembl.org. New features include a new view called AlignSliceView, which presents a sequence with its alignments, the addition of multiple alignments for human, mouse, rate, and dog using the Mercator and Mlagan alignment programs, and a new page called GeneRegulationView, which displays all the regulatory factors for a given gene.


Release 43.00 of the RESID database of protein modifications is available at ftp://ftp.ebi.ac.uk/pub/databases/RESID/ and ftp://ftp.ncifcrf.gov/pub/users/residues.


Version 4.930 of AnnHyb, a tool for working with and managing nucleotide sequences in multiple formats, is available at http://bioinformatics.org/annhyb. Features include format conversion, a sequence viewer, a sequence editor, oligonucleotide alignment, restriction analysis, pattern searching, retrieval from servers, multi-alignment viewer, and consensus determination.

 

People in the News

Google has appointed Shirley Tilghman, Princeton University's president and professor of molecular biology, to its board of directors. Tilghman was a member of the National Research Council committee that guided the US effort in the Human Genome Project and was a founding member of the National Advisory Council of the Human Genome Project Initiative for the National Institutes of Health. She was the founding director of Princeton's multi-disciplinary Lewis-Sigler Institute for Integrative Genomics and became the university's president in June 2001.

Filed under

The Scan

Pig Organ Transplants Considered

The Wall Street Journal reports that the US Food and Drug Administration may soon allow clinical trials that involve transplanting pig organs into humans.

'Poo-Bank' Proposal

Harvard Medical School researchers suggest people should bank stool samples when they are young to transplant when they later develop age-related diseases.

Spurred to Develop Again

New Scientist reports that researchers may have uncovered why about 60 percent of in vitro fertilization embryos stop developing.

Science Papers Examine Breast Milk Cell Populations, Cerebral Cortex Cellular Diversity, Micronesia Population History

In Science this week: unique cell populations found within breast milk, 100 transcriptionally distinct cell populations uncovered in the cerebral cortex, and more.