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Funding Update: NIH Bioinformatics Grants Awarded May 25 — June 28, 2012

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Project Title: Information Explorer: A Suite of Tools for Cross-Study Genetic Loci Discovery
Principal Investigator: Arens, Yigal
Organization: University of Southern California
Project Start Date: July 19, 2011
Project End Date: May 31, 2013
Funding Institute: NHLBI
FY Total Cost: $440,305


Project Title: Parallel Software for Fast Automated Determination of Virus Structures
Principal Investigator: Baker, Timothy S.
Organization: University of California, San Diego
Project Start Date: June 1, 2010
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $305,910


Project Title: Statistical Methods and Software for QTL Mapping
Principal Investigator: Broman, Karl W.
Organization: University of Wisconsin, Madison
Project Start Date: June 1, 2005
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $274,823


Project Title: SPBASE: A Database System for Echinoderm Genome Information
Principal Investigator: Cameron, Robert Andrew
Organization: California Institute of Technology
Project Start Date: June 15, 2012
Project End Date: May 31, 2017
Funding Institute: NICHD
FY Total Cost: $583,043


Project Title: Continued Development of CellProfiler Cell Image Analysis Software
Principal Investigator: Carpenter, Anne E.
Organization: Broad Institute
Project Start Date: July 1, 2010
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $503,268


Project Title: Statistical Methods for the Study of Alternative Splicing Using Deep Sequencing
Principal Investigator: Chen, Liang
Organization: University of Southern California
Project Start Date: Sept 5, 2011
Project End Date: May 31, 2015
Funding Institute: NIGMS
FY Total Cost: $348,323


Project Title: Integrated Prediction of Protein Structure at 1D, 2D, and 3D Levels
Principal Investigator: Chen, Jianlin
Organization: University of Missouri, Columbia
Project Start Date: June 1, 2010
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $294,112


Project Title: Genetic Association in Schizophrenia and Other Disorders
Principal Investigator: Devlin, Bernie
Organization: University of Pittsburgh, Pittsburgh
Project Start Date: July 1, 1998
Project End Date: May 31, 2013
Funding Institute: NIMH
FY Total Cost: $401,273


Project Title: Pathway-Guide: A Novel Tool for the Analysis of Signaling and Metabolic Pathways
Principal Investigator: Draghici, Sorin
Organization: Advaita
Project Start Date: March 1, 2009
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $734,239


Project Title: Center for Critical Assessment of Structure Prediction
Principal Investigator: Fidelis, Krzysztof A.
Organization: University of California, Davis
Project Start Date: June 15, 2012
Project End Date: April 30, 2016
Funding Institute: NIGMS
FY Total Cost: $544,486


Project Title: Online Mendelian Inheritance in Man (OMIM)
Principal Investigator: Hamosh, Ada
Organization: Johns Hopkins University
Project Start Date: June 12, 2012
Project End Date: Feb. 28, 2015
Funding Institute: NHGRI
FY Total Cost: $2,079,754


Project Title: Identification of Protein-Metabolite Interactome
Principal Investigator: Kihara, Daisuke
Organization: Purdue University, West Lafayette
Project Start Date: Sept. 1, 2011
Project End Date: May 31, 2015
Funding Institute: NIGMS
FY Total Cost: $280,954


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Project Title: Statistical Methods for Rare Variant Effects in Sequencing Association Studies
Principal Investigator: Lee, Seunggeun
Organization: Harvard University
Project Start Date: June 15, 2012
Project End Date: March 31, 2014
Funding Institute: NHLBI
FY Total Cost: $89,172


Project Title: The Comparative Toxicogenomics Database
Principal Investigator: Mattingly, Carolyn
Organization: Mount Desert Island Biological Lab
Project Start Date: Aug. 1, 2005
Project End Date: April 31, 2016
Funding Institute: NIEHS
FY Total Cost: $516,903


Project Title: Integrating Top-Down and Bottom-Up Models in Systems Biology
Principal Investigator: Murali, TM
Organization: Virginia Polytechnic Institute
Project Start Date: May 1, 2011
Project End Date: April 30, 2013
Funding Institute: NIGMS
FY Total Cost: $375,481


Project Title: Phenotype Discovery in NHLBI Genomic Studies
Principal Investigator: Ohno-Machado, Lucila
Organization: University of California, San Diego
Project Start Date: July 19, 2011
Project End Date: May 31, 2013
Funding Institute: NHLBI
FY Total Cost: $516,448


Project Title: Liability Threshold Modeling of Genes and Environment in Case Control Studies
Principal Investigator: Price, Alkes L.
Organization: Harvard University
Project Start Date: June 1, 2012
Project End Date: May 31, 2015
Funding Institute: NIEHS
FY Total Cost: $169,913


Project Title: Clinical Genome Inference System: Variant Prioritization for Clinical Diagnostics
Principal Investigator: Reese, Martin G.
Organization: Omicia
Project Start Date: June 6, 2012
Project End Date: Aug. 31, 2012
Funding Institute: NHGRI
FY Total Cost: $174,360


Project Title: The Gene Wiki: Community Intelligence Applied to Gene Annotation
Principal Investigator: Su, Andrew I.
Organization: Scripps Research Institute
Project Start Date: Aug. 1, 2010
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $300,287


Project Title: Analysis of Rare Variants & Population Structure
Organization: University of Washington
Project Start Date: NA
Project End Date: NA
Funding Institute: NIGMS
FY Total Cost: $236,925


Project Title: Resolving Complex Traits through Inferred Coancestry of Genome Segments
Organization: University of Washington
Project Start Date: NA
Project End Date: NA
Funding Institute: NIGMS
FY Total Cost: $236,924


Project Title: Dissection of Trait Variation
Organization: University of Washington
Project Start Date: NA
Project End Date: NA
Funding Institute: NIGMS
FY Total Cost: $236,923


Project Title: Bayesian Methods for Genome-Wide Interacting QTL Mapping
Principal Investigator: Yi, Nengjun
Organization: University of Alabama, Birmingham
Project Start Date: June 1, 2005
Project End Date: May 31, 2014
Funding Institute: NIGMS
FY Total Cost: $302,351


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