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Funding Update: NIH Bioinformatics Grants Awarded July 10 — Aug. 19, 2013, Part 2

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Part 2 of 2

Project Title: Interactive and Collaborative Online Virtual Screening
Principal Investigator: Koes, David
Organization: University of Pittsburgh
Project Start Date: Aug. 10, 2013
Project End Date: April 30, 2016
Funding Institute: NIGMS
FY Total Cost: $190,550


Project Title: New Computational Methods for Analyzing the Response to Vaccination and Infection
Principal Investigator: Koller, Daphne
Organization: Stanford University
Project Start Date: Not Listed
Project End Date: Not Listed
Funding Institute: NIAID
FY Total Cost: $205,335


Project Title: Enhancing Genome-wide Association Studies via Integrative Network Analysis
Principal Investigator: Koyuturk, Mehmet
Organization: Case Western Reserve University
Project Start Date: Aug. 1, 2012
Project End Date: July 31, 2016
Funding Institute: NLM
FY Total Cost: $294,345


Project Title: HIV Incidence Assay via Deep Sequencing and Statistical Tests
Principal Investigator: Lee, Ha Youn
Organization: University of Southern California
Project Start Date: Aug. 10, 2011
Project End Date: July 31, 2015
Funding Institute: NIAID
FY Total Cost: $481,766


Project Title: Techniques to Integrate Disparate Data: Clinical Personalized Pragmatic Prediction
Principal Investigator: Lenert, Leslie
Organization: University of Utah
Project Start Date: Aug. 1, 2013
Project End Date: April 30, 2017
Funding Institute: NIGMS
FY Total Cost: $568,249


Project Title: Identification of Causal Variants in Psoriasis
Principal Investigator: Liao, Wilson
Organization: University of California, San Francisco
Project Start Date: July 19, 2013
Project End Date: May 31, 2017
Funding Institute: NIAMS
FY Total Cost: $465,839


Project Title: Novel Computational Methods for Modeling Cytochrome P450 Mediated Drug Metabolism
Principal Investigator: Lill, Markus
Organization: Purdue University
Project Start Date: Sept. 1, 2010
Project End Date: July 31, 2015
Funding Institute: NIGMS
FY Total Cost: $193,970


Project Title: Continued Maintenance and Development of Software: Integrated Genome Browser
Principal Investigator: Loraine, Ann
Organization: University of North Carolina, Charlotte
Project Start Date: July 1, 2011
Project End Date: June 30, 2016
Funding Institute: NIGMS
FY Total Cost: $284,041


Project Title: Search Algorithms for Drug Combinations: Extending Approved Cancer Therapies
Principal Investigator: Piermarocchi, Carlo
Organization: Salgomed
Project Start Date: Aug. 1, 2013
Project End Date: Aug 31, 2014
Funding Institute: NCI
FY Total Cost: $162,424


Project Title: Quantitative Analysis of LC-MS Data for Peptide and Glycan Biomarker Discovery
Principal Investigator: Ressom, Habtom
Organization: Georgetown University
Project Start Date: Aug. 1, 2010
Project End Date: July 31, 2015
Funding Institute: NIGMS
FY Total Cost: $256,631


Project Title: A New Approach to Phylogenetic Analysis Using Structural Information
Principal Investigator: Rodriguez, Abel
Organization: University of California, Santa Cruz
Project Start Date: Sept. 30, 2009
Project End Date: July 31, 2014
Funding Institute: NIGMS
FY Total Cost: $266,418


Project Title: Advanced Strategies for Genotype Imputation
Principal Investigator: Rosenberg, Noah
Organization: Stanford University
Project Start Date: Sept. 30, 2009
Project End Date: July 31, 2014
Funding Institute: NIGMS
FY Total Cost: $366,830


Project Title: Conte Center for Computational Systems Genomics of Neuropsychiatric Phenotypes
Principal Investigator: Rzhetsky, Andrey
Organization: University of Chicago
Project Start Date: Sept. 22, 2011
Project End Date: July 31, 2016
Funding Institute: NIMH
FY Total Cost: $1,970,132


Project Title: New Physical Methodologies for Genomic Analysis
Principal Investigator: Schwartz, David
Organization: University of Wisconsin, Madison
Project Start Date: Jan. 1, 1991
Project End Date: June 30, 2015
Funding Institute: NHGRI
FY Total Cost: $624,741


Project Title: BioGPS: A Crowdsourced Portal for Gene-centric Online Resources
Principal Investigator: Su, Andrew
Organization: Scripps Research Institute
Project Start Date: Aug. 1, 2008
Project End Date: April 30, 2017
Funding Institute: NIGMS
FY Total Cost: $496,990


Project Title: Statistical Methods for Studies of Rare Variants
Principal Investigator: Sunyaev, Shamil
Organization: Brigham and Women's Hospital
Project Start Date: Aug. 15, 2013
Project End Date: June 30, 2017
Funding Institute: NIMH
FY Total Cost: $539,763


Project Title: Bayesian Analysis of Structural Shape and Conformation
Principal Investigator: Theobald, Douglas
Organization: Brandeis University
Project Start Date: Aug. 5, 2010
Project End Date: July 31, 2015
Funding Institute: NIGMS
FY Total Cost: $277,111


Project Title: Statistical Method for Identifying Genetic Modifiers of Conotruncal Heart Disease
Principal Investigator: Wang, Tao
Organization: Albert Einstein College of Medicine
Project Start Date: Aug. 1, 2013
Project End Date: April 30, 2015
Funding Institute: NHLBI
FY Total Cost: $206,307


Project Title: Advanced Epigenome Browser with Enhanced Visualization and Analysis Tools
Principal Investigator: Wang, Ting
Organization: Washington University
Project Start Date: July 16, 2013
Project End Date: June 30, 2017
Funding Institute: NHGRI
FY Total Cost: $396,750


Project Title: Whole Genome Assembly Resources for Aquatic Models of Human Disease
Principal Investigator: Warren, Wesley
Organization: Washington University
Project Start Date: Sept. 15, 2011
Project End Date: July 31, 2014
Funding Institute: NIH
FY Total Cost: $166,803


Project Title: Quantile Analysis on Human Complex Traits in GWAS and Sequencing Studies
Principal Investigator: Wei, Ying
Organization: Columbia University
Project Start Date: Aug. 8, 2013
Project End Date: June 30, 2015
Funding Institute: NHGRI
FY Total Cost: $80,000


Project Title: Integrative Pipeline for Analysis and Translational Application of TCGA Data (GDAC)
Principal Investigator: Weinstein, John
Organization: UT MD Anderson Cancer Center
Project Start Date: Sept. 29, 2009
Project End Date: July 31, 2014
Funding Institute: NCI
FY Total Cost: $1,280,091


Project Title: ODF: Support Infrastructure for Next-gen Sequence Data Storage Analysis and Management
Principal Investigator: White, Owen
Organization: University of Maryland, Baltimore
Project Start Date: May 15, 2012
Project End Date: April 30, 2015
Funding Institute: NHGRI
FY Total Cost: $858,970


Project Title: PRO: A Protein Ontology in OBO Foundry for Integration of Biomedical Knowledge
Principal Investigator: Wu, Cathy
Organization: University of Delaware
Project Start Date: May 1, 2007
Project End Date: June 30, 2015
Funding Institute: NIGMS
FY Total Cost: $843,962


Project Title: A Novel Co-expression Network Approach that is Robust to Genetic Heterogeneity
Principal Investigator: Zhang, Weixiong
Organization: Washington University
Project Start Date: Sept. 1, 2012
Project End Date: July 31, 2016
Funding Institute: NIGMS
FY Total Cost: $286,026


Project Title: Predictive Computational Acute Toxicity Modeling by Profiling Chemicals with [Public Toxicity Bioassay Data]
Principal Investigator: Zhu, Hao
Organization: Rutgers University
Project Start Date: Aug. 9, 2013
Project End Date: July 31, 2016
Funding Institute: NIEHS
FY Total Cost: $464,983


Project Title: RNA 3D Motif Search, Atlas, and Prediction from Sequence
Principal Investigator: Zirbel, Craig
Organization: Bowling Green State University
Project Start Date: Aug. 10, 2010
Project End Date: July 31, 2014
Funding Institute: NIGMS
FY Total Cost: $294,173


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