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Funding Update: NIH Bioinformatics Grants Awarded Feb. 14, — March 12, 2014

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Project Title: De Novo Assembly Tools: Research with Unbiased Engines (DNA-True)
Principal Investigator: Birol, Inanc
Organization: British Columbia Cancer Agency
Project Start Date: March 4, 2014
Project End Date: Jan. 31, 2017
Funding Institute: NHGRI
FY Total Cost: $249,465


Project Title: Mouse Phenome Project
Principal Investigator: Bogue, Molly
Organization: Jackson Laboratory
Project Start Date: July 1, 2004
Project End Date: Feb. 28, 2015
Funding Institute: NIDA
FY Total Cost: $392,195


Project Title: Computational Image Analysis for Cellular and Developmental Biology
Principal Investigator: Danuser, Gaudenz
Organization: Marine Biological Laboratory
Project Start Date: March 1, 2013
Project End Date: Feb. 28, 2018
Funding Institute: NIGMS
FY Total Cost: $59,383


Project Title: Bioinformatic Approaches to Small Molecule Profiling of Cardiometabolic Disease
Principal Investigator: Deo, Rahul Chandrakant
Organization: University of California, San Francisco
Project Start Date: July 15, 2010
Project End Date: Feb. 28, 2015
Funding Institute: NHLBI
FY Total Cost: $136,958


Project Title: A Turnkey System for High-throughput Variant Discovery and Interpretation
Principal Investigator: Ding, Li
Organization: Washington University
Project Start Date: Feb. 1, 2012
Project End Date: Dec. 31, 2015
Funding Institute: NHGRI
FY Total Cost: $755,095


Project Title: Continued Development and Maintenance of Glycam-Web
Principal Investigator: Foley, Lachele
Organization: University of Georgia
Project Start Date: May 1, 2012
Project End Date: Feb. 29, 2016
Funding Institute: NIGMS
FY Total Cost: $284,846


Project Title: Detecting GxE Interactions in Genome-wide Association Studies
Principal Investigator: Gauderman, William James
Organization: University of Southern California
Project Start Date: May 1, 2012
Project End Date: Feb. 28, 2015
Funding Institute: NHLBI
FY Total Cost: $161,046


Project Title: Detecting Genome-wide Epistasis with Efficient Bayesian Network Learning
Principal Investigator: Jiang, Xia
Organization: University of Pittsburgh
Project Start Date: Sept. 30, 2010
Project End Date: Feb. 28, 2015
Funding Institute: NLM
FY Total Cost: $198,847


Project Title: Statistical Tools and Methods for Next-generation Sequencing in Epigenetics
Principal Investigator: Johnson, William Evan
Organization: Boston University Medical Campus
Project Start Date: June 1, 2010
Project End Date: Feb. 28, 2015
Funding Institute: NHGRI
FY Total Cost: $329,464


Project Title: Imputation and Analysis of Rare Variants in Admixed Populations
Principal Investigator: Li, Yun
Organization: University of North Carolina, Chapel Hill
Project Start Date: May 16, 2012
Project End Date: Feb. 28, 2015
Funding Institute: NHGRI
FY Total Cost: $308,717


Project Title: Robust Rank-based Methods and Detection of GxE in Cancer Etiology and Survival
Principal Investigator: Ma, Shuangge
Organization: Yale University
Project Start Date: March 13, 2012
Project End Date: Feb. 28, 2015
Funding Institute: NCI
FY Total Cost: $130,370


Project Title: Cloud Computing Platform for Virtual Screening and Drug Discovery
Principal Investigator: Moldover, Brian
Organization: B-Tech Consulting
Project Start Date: July 1, 2011
Project End Date: Feb. 29, 2016
Funding Institute: NIGMS
FY Total Cost: $681,314


Project Title: Novel Tools for Familial Risk Prediction
Principal Investigator: Parmigiani, Giovanni Luigi
Organization: Dana-Farber Cancer Institute
Project Start Date: March 1, 2013
Project End Date: Feb. 28, 2015
Funding Institute: NCI
FY Total Cost: $168,262


Project Title: Transgenic Mice and Bioinformatics Tools to Track Astrocyte Diversification In Situ
Principal Investigator: Pfaff, Samuel
Organization: Salk Institute for Biological Studies
Project Start Date: Jan. 1, 2013
Project End Date: Dec. 31, 2016
Funding Institute: NIMH
FY Total Cost: $397,303


Project Title: Algorithms and Software for the Assembly of Metagenomic Data
Principal Investigator: Pop, Mihai
Organization: University of Maryland
Project Start Date: Mar. 21, 2013
Project End Date: Feb. 28, 2017
Funding Institute: NIAID
FY Total Cost: $435,034


Project Title: Classifying DNA Mismatch Repair Gene Variants of Unknown Significance
Principal Investigator: Tavtigian, Sean Vahram
Organization: University of Utah
Project Start Date: Mar. 1, 2013
Project End Date: Feb. 28, 2017
Funding Institute: NCI
FY Total Cost: $501,939


Project Title: Methods for Gene-environment Interactions Involving Gene Expression
Principal Investigator: Storey, John
Organization: Princeton University
Project Start Date: Mar. 13, 2012
Project End Date: Feb. 28, 2015
Funding Institute: NHGRI
FY Total Cost: $159,120


Project Title: A Multistage Approach to Protein-protein Docking
Principal Investigator: Vajda, Sandor
Organization: Boston University
Project Start Date: Sept. 1, 2000
Project End Date: Feb. 28, 2017
Funding Institute: NIGMS
FY Total Cost: $284,681


Project Title: Integrated Variation Detection Annotation and Analysis for High-throughput Seque[ncing]
Principal Investigator: Wang, Kai
Organization: University of Southern California
Project Start Date: March 23, 2012
Project End Date: Feb. 28, 2017
Funding Institute: NHGRI
FY Total Cost: $354,302


Project Title: High-throughput Mobile Element Genotyping Using Next-generation Sequecing
Principal Investigator: Xing, Jinchuan
Organization: Rutgers, The State University of New Jersey
Project Start Date: Sept. 26, 2010
Project End Date: Feb. 28, 2015
Funding Institute: NHGRI
FY Total Cost: $241,403


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