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Funding Update: Oct 7, 2011

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NIH bioinformatics grants awarded Sept. 10 — Oct. 4, 2011

Project Title: Computational Methods Towards the Spatio-Temporal Organization of the Proteome
Principal Investigator: Alber, Frank
Organization: University of Southern California
Project Start Date: Sept. 30, 2011
Project End Date: Aug. 31, 2016
Funding Institute: NIGMS
FY Total Cost: $325,302


Project Title: Predicting Prostate Cancer Aggressiveness
Principal Investigator: Anderson, Alexander R.A.
Organization: H. Lee Moffitt Cancer Center
Project Start Date: Sept. 14, 2011
Project End Date: Aug. 31, 2016
Funding Institute: NCI
FY Total Cost: $636,055


Project Title: Shared Laboratory Resource Core
Principal Investigator: Arevalo, Jorge
Organization: University of California, San Diego
Project Start Date: July 1, 2011
Project End Date: June 30, 2017
Funding Institute: NIAID
FY Total Cost: $130,081


Project Title: Public/Private Collaboration for High-Quality Protein Ligand Data
Principal Investigator: Carlson, Heather A.
Organization: University of Michigan, Ann Arbor
Project Start Date: Sept. 29, 2011
Project End Date: Aug. 31, 2013
Funding Institute: NIGMS
FY Total Cost: $964,380


Project Title: Genomic Database for the Yeast Saccharomyces
Principal Investigator: Cherry, Joe Michael
Organization: Stanford University
Project Start Date: Sept. 30, 1995
Project End Date: Feb. 29, 2016
Funding Institute: NHGRI
FY Total Cost: $2,416,667


Project Title: IBD Genetic Consortium Data Coordinating Center
Principal Investigator: Cho, Judy H.
Organization: Yale University
Project Start Date: Sept. 30, 2002
Project End Date: Aug. 31, 2012
Funding Institute: NIDDK
FY Total Cost: $1,009,248


Project Title: Advancing the Scientific Potential of Transcriptomics in Aquatic Models
Principal Investigator: Cresko, William A.
Organization: University of Oregon
Project Start Date: Sept. 15, 2011
Project End Date: July 31, 2015
Funding Institute: NCRR
FY Total Cost: $553,238


Project Title: Systematic Data Curation and Integration to Link Models of Human Disease
Principal Investigator: Dolinski, Kara
Organization: Princeton University
Project Start Date: Sept. 14, 2011
Project End Date: July 31, 2015
Funding Institute: NCRR
FY Total Cost: $674,775


Project Title: Mouse Genome Database
Principal Investigator: Eppig, Janan T.
Organization: Jackson Laboratory
Project Start Date: July 1, 1997
Project End Date: Feb. 28, 2016
Funding Institute: NHGRI
FY Total Cost: $4,416,663


Project Title: Mouse Phenotyping Informatics Infrastructure – MP12
Principal Investigator: Flicek, Paul
Organization: European Molecular Biology Laboratory
Project Start Date: Sept. 16, 2011
Project End Date: July 31, 2016
Funding Institute: NHGRI, NIGMS
FY Total Cost: $2,000,000


Project Title: High Performance Validation and Classification of Metagenomic Ribosomal-RNA Sequence
Principal Investigator: Frank, Daniel
Organization: University of Colorado, Denver
Project Start Date: Sept. 27, 2010
Project End Date: June 30, 2012
Funding Institute: NHGRI
FY Total Cost: $228,750


Project Title: EMERGE Coordinating Center
Principal Investigator: Hanes, Jonathan L.
Organization: Vanderbilt University
Project Start Date: Aug. 15, 2011
Project End Date: July 31, 2015
Funding Institute: NHGRI
FY Total Cost: $1,220,000


Project Title: Bayesian Approaches to Model Selection for Survival Data
Principal Investigator: Ibrahim, Joseph G.
Organization: University of North Carolina, Chapel Hill
Project Start Date: Mar. 15, 1996
Project End Date: Aug. 31, 2015
Funding Institute: NIGMS
FY Total Cost: $303,739


Project Title: Software for the Statistical Analysis of Microarray Probe Level Data
Principal Investigator: Irizarry, Rafael A.
Organization: Johns Hopkins University
Project Start Date: July 1, 2005
Project End Date: July 31, 2014
Funding Institute: NCRR
FY Total Cost: $373,321


Project Title: Tools for Detecting Biologically Important Sequence Variation in Cancer
Principal Investigator: Karchin, Rachel
Organization: Johns Hopkins University
Project Start Date: Sept. 16, 2011
Project End Date: Aug. 31, 2013
Funding Institute: NCI
FY Total Cost: $269,680


Project Title: The UCSC Encode Data Coordination Center
Principal Investigator: Kent, William J.
Organization: University of California, Santa Cruz
Project Start Date: Sept. 28, 2007
Project End Date: June 30, 2012
Funding Institute: NHGRI
FY Total Cost: $1, 742,548


Project Title: Computational Biology Core
Principal Investigator: Korb, Bette T.
Organization: Duke University
Project Start Date: July 1, 2011
Project End Date: June 30, 2012
Funding Institute: NIAID
FY Total Cost: $1, 902,522


Project Title: Advances in Computational Gene Finding
Principal Investigator: Korf, Ian F.
Organization: University of California, Davis
Project Start Date: Sept. 1, 2007
Project End Date: June 30, 2012
Funding Institute: NHGRI
FY Total Cost: $171,839


Project Title: Concordant Integrative Analysis of Multiple Gene Expression Data Sets
Principal Investigator: Lai, Yinglei
Organization: George Washington University
Project Start Date: Sept. 1, 2010
Project End Date: Aug. 31, 2013
Funding Institute: NIGMS
FY Total Cost: $150,708


Project Title: Comparative Genomics of Protein Structure and Function
Principal Investigator: Lichtarge, Oliver
Organization: Baylor College of Medicine
Project Start Date: Apr. 1, 2007
Project End Date: Aug. 31, 2015
Funding Institute: NIGMS
FY Total Cost: $390,885


Project Title: Inferring Mammalian Transcriptional Regulatory Networks from Epigenomics
Principal Investigator: Liu, Xiaole S.
Organization: Dana-Farber Cancer Institute
Project Start Date: Sept. 10, 2011
Project End Date: Aug. 31, 2015
Funding Institute: NIGMS
FY Total Cost: $341,250

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Project Title: Integrative Statistical Methods and Tools for Analysis of Perturbation Signatures
Principal Investigator: Medvedovic, Mario
Organization: University of Cincinnati
Project Start Date: Sept. 24, 2011
Project End Date: June 30, 2013
Funding Institute: NHLBI
FY Total Cost: $386,335


Project Title:

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