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Funding Update: Jun 4, 2010 (rev. 1)

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NIH Bioinformatics Grants awarded April 20 — May 20, 2010 (part two of two; part one is available here.)

Note: Budget start/end dates are provided in cases where project start/end dates were not available in the NIH database.

Building and Validating Location Proteomics Databases
Principal investigator: Murphy, Robert
Project start date: Jan. 14, 2010
Project end date: Dec. 31, 2010
Organization: Carnegie-Mellon University
NIH institute: NIGMS
FY 2010 funding amount: $123,328


Bioinformatics and Biotechnology
Principal investigator: Naeve, Clayton
Budget end date: April 1, 2010
Budget end date: March 31, 2011
Organization: St. Jude Children's Research Hospital
NIH institute: NCI
FY 2010 funding amount: $88,414


Genomics/Bioinformatics Core
Principal investigator: Nelson, Stanley
Budget end date: April 1, 2010
Budget end date: March 31, 2011
Organization: University of California Los Angeles
NIH institute: NIAMS
FY 2010 funding amount: $138,502


Biostatistics and Bioinformatics Core
Principal investigator: Neuberg, Donna
Project start date: Dec. 1, 2009
Project end date: Nov. 30, 2014
Organization: Dana-Farber Cancer Institute
NIH institute: NCI
FY 2010 funding amount: $82,124


Cancer Informatics
Principal investigator: Page, C. David
Budget end date: April 1, 2010
Budget end date: March 31, 2011
Organization: University of Wisconsin Madison
NIH institute: NCI
FY 2010 funding amount: $356,560


Facility Core B: Bioinformatics, Biostatistics & Computational Biology
Principal investigator: Parrish, Rudolph Sanders
Budget end date: April 1, 2010
Budget end date: March 31, 2011
Organization: University of Louisville
NIH institute: NIEHS
FY 2010 funding amount: $287,180


Imaging/Bioinformatics Core
Principal investigator: Parvin, Bahram
Budget end date: March 1, 2010
Budget end date: Feb. 28, 2011
Organization: University of California San Francisco
NIH institute: NCI
FY 2010 funding amount: $284,377


Informatics Methods for Identifying Breast Cancer Control Genes and Proteins
Principal investigator: Catalyurek, Umit
Project start date: June 1, 2009
Project end date: April 30, 2014
Organization: Ohio State University
NIH institute: NCI
FY 2010 funding amount: $457,200


Refinement Methods for Protein Docking Based on Exploring Multi-Dimensional Energy
Principal investigator: Kozakov, Dmytro
Project start date: April 1, 2010
Project end date: March 31, 2015
Organization: Boston University
NIH institute: NIGMS
FY 2010 funding amount: $309,416


Integrative Meta-Analysis of Microarray Data
Principal investigator: Pavlidis, Paul
Project start date: Aug. 1, 2005
Project end date: Nov. 30, 2010
Organization: University of British Columbia
NIH institute: NIGMS
FY 2010 funding amount: $186,255


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Gene Expression Database for Mouse Development
Principal investigator: Ringwald, Martin
Project start date: May 1, 2010
Project end date: Oct. 31, 2010
Organization: Jackson Laboratory
NIH institute: NICHD
FY 2010 funding amount: $544,238


Rebase — The Restriction Enzyme Database
Principal investigator: Roberts, Richard
Project start date: Dec. 1, 1994
Project end date: Feb. 28, 2011
Organization: New England Biolabs
NIH institute: NLM
FY 2010 funding amount: $266,531


Statistical & Computational Tools for Reconstruction of Gene Regulatory Networks
Principal investigator: Salzman, Peter
Project start date: Jan. 1, 2009
Project end date: Aug. 17, 2011
Organization: University of Rochester
NIH institute: NLM
FY 2010 funding amount: $242,736


Petascale Molecular Dynamics Data Processing System
Principal investigator: Schulten, Klaus
Project start date: April 1, 2010
Project end date: March 31, 2011
Organization: University of Illinois Urbana-Champaign
NIH institute: NCRR
FY 2010 funding amount: $488,504


Integrated Modeling of Adaptive Neuronal Regulation
Principal investigator: Schwaber, James
Project start date: May 8, 2009
Project end date: March 31, 2013
Organization: Thomas Jefferson University
NIH institute: NIGMS
FY 2010 funding amount: $382,388


Biostatistics Bioinformatics
Principal investigator: Shyr, Yu
Budget end date: May 1, 2010
Budget end date: April 30, 2011
Organization: Vanderbilt University
NIH institute: NCI
FY 2010 funding amount: $291,299


Interaction Pattern Based Predictor of Protein Structure
Principal investigator: Skolnick, Jeffrey
Project start date: May 1, 1994
Project end date: Jan. 31, 2013
Organization: Georgia Institute of Technology
NIH institute: NIGMS
FY 2010 funding amount: $291,506


High Performance Clustered Storage for Image Management
Principal investigator: Sorger, Peter Karl
Project start date: May 20, 2010
Project end date: May 19, 2011
Organization: Harvard University (Medical School)
NIH institute: NCRR
FY 2010 funding amount: $494,553


Reactome: An Open Knowledgebase of Human Pathways
Principal investigator: Stein, Lincoln
Project start date: April 1, 2007
Project end date: Feb. 28, 2011
Organization: Ontario Institute for Cancer Research
NIH institute: NHGRI
FY 2010 funding amount: $858,478


A Multistage Approach to Protein-Protein Docking
Principal investigator: Vajda, Sandor
Project start date: Sept. 1, 2000
Project end date: Feb. 28, 2013
Organization: Boston University
NIH institute: NIGMS
FY 2010 funding amount: $263,835


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Computational Biology Core
Principal investigator: Vanderlaan, Mark
Budget end date: April 1, 2010
Budget end date: March 31, 2011
Organization: University of California Berkeley
NIH institute: NIEHS
FY 2010 funding amount: $238,697


Comprehensive Database System for Modern MALDI-TOF and TOF-TOF MS and MS-MS
Principal investigator: Vestal, Marvin
Project start date: May 15, 2010
Project end date: Nov. 14, 2010
Organization: Virgin Instruments
NIH institute: NCRR
FY 2010 funding amount: $106,041


Multilevel Parallelization of Software for Accurate Protein-Ligand Affinities
Principal investigator: Webb, Simon
Project start date: May 1, 2010
Project end date: April 30, 2011
Organization: Verachem
NIH institute: NIGMS
FY 2010 funding amount: $140,802


Development of Cheminformatic Module for Information Content Analysis Software
Principal investigator: Wyckoff, Gerald
Project start date: May 1, 2010
Project end date: April 30, 2011
Organization: Bioinformatica
NIH institute: NIGMS
FY 2010 funding amount: $128,288


New Computational Methods for Data-Driven Protein Structure Prediction
Principal investigator: Xu, Jinbo
Project start date: May 14, 2010
Project end date: April 30, 2015
Organization: Toyota Technological Institute / Chicago
NIH institute: NIGMS
FY 2010 funding amount: $268,555


Analysis of Genomic Data for Complex Traits
Principal investigator: Zhang, Heping
Project start date: July 1, 2003
Project end date: March 31, 2012
Organization: Yale University
NIH institute: NIDA
FY 2010 funding amount: $327,690


Mass Informatics of Two-Dimensional Gas Chromatography Time-of-Flight Mass Spectra
Principal investigator: Zhang, Xiang
Project start date: May 1, 2009
Project end date: April 30, 2013
Organization: University of Louisville
NIH institute: NIGMS
FY 2010 funding amount: $345,025


I-Tasser Based Atomic-Level Protein Structure Prediction
Principal investigator: Zhang, Yang
Project start date: April 1, 2008
Project end date: March 31, 2013
Organization: University of Michigan at Ann Arbor
NIH institute: NIGMS
FY 2010 funding amount: $258,494


Integrated Cheminformatics Resource for Orphan Neurodegenerative Diseases
Principal investigator: Zheng, Weifan
Project start date: Jan. 1, 2009
Project end date: Dec. 31, 2012
Organization: North Carolina Central University
NIH institute: NIGMS
FY 2010 funding amount: $98,700


Integrative Analysis of Cross-Platform Microarray Data
Principal investigator: Zhou, Xianghong Jasmine
Project start date: Jan. 1, 2006
Project end date: Dec. 31, 2010
Organization: University of Southern California
NIH institute: NIGMS
FY 2010 funding amount: $188,696

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