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Funding Update: May 28, 2010

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NIH Bioinformatics Grants awarded April 20 — May 20, 2010 (part one of two)

Note: Budget start/end dates are provided in cases where project start/end dates were not available in the NIH database.

Orchestra: A High Performance Biomedical Supercomputing Collaborative
Principal investigator: Athanasoulis, Marcos
Project start date: May 6, 2010
Project end date: May 5, 2011
Organization: Harvard University (Medical School)
NIH institute: NCRR
FY 2010 funding amount: $3,697,235


Software Maintenance for Biomolecular Complexes
Principal investigator: Bajaj, Chandrajit
Project start date: Feb. 15, 2007
Project end date: Jan. 31, 2011
Organization: University of Texas Austin
NIH institute: NIBIB
FY 2010 funding amount: $289,460


High Resolution Structure Modeling with Rosetta
Principal investigator: Baker, David
Project start date: April 1, 2010
Project end date: March 31, 2014
Organization: University of Washington
NIH institute: NIGMS
FY 2010 funding amount: $295,027


Bioinformatics Core
Principal investigator: Benoist, Christophe
Budget start date: April 1, 2010
Budget end date: March 31, 2011
Organization: Joslin Diabetes Center
NIH institute: NIDDK
FY 2010 funding amount: $145,169


Gene Ontology Consortium
Principal investigator: Blake, Judith
Project start date: Jan. 19, 2001
Project end date: Feb. 28, 2012
Organization: Jackson Laboratory
NIH institute: NHGRI
FY 2010 funding amount: $3,513,343


Gene Prediction by Markov Models and Complementary Methods
Principal investigator: Borodovsky, Mark
Project start date: March 15, 1993
Project end date: March 31, 2013
Organization: Georgia Institute of Technology
NIH institute: NHGRI
FY 2010 funding amount: $573,248


Genomics & Bioinformatics
Principal investigator: Brennan, Cameron
Budget start date: March 1, 2010
Budget end date: Feb. 28, 2011
Organization: Dana-Farber Cancer Institute
NIH institute: NCI
FY 2010 funding amount: $199,507


New Bioinformatics Tools for Analyzing Immunological Data
Principal investigator: Butte, Atul
Budget start date: April 1, 2010
Budget end date: March 31, 2011
Organization: Stanford University
NIH institute: NIAID
FY 2010 funding amount: $184,721


Bayesian Statistics and Algorithms for Homology Modeling
Principal investigator: Dunbrack, Roland
Project start date: May 15, 2008
Project end date: March 31, 2012
Organization: Institute for Cancer Research
NIH institute: NIGMS
FY 2010 funding amount: $310,959


Computational Biology Core
Principal investigator: Garner, Harold
Budget start date: March 1, 2010
Budget end date: Feb. 28, 2011
Organization: University of Texas Medical Branch Galveston
NIH institute: NIAID
FY 2010 funding amount: $409,430


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Flybase: A Drosophila Genomic and Genetic Database
Principal investigator: Gelbart, William Martin
Project start date: August 1, 1992
Project end date: Dec. 31, 2013
Organization: Harvard University
NIH institute: NHGRI
FY 2010 funding amount: $4,234,145


Connjur: A Software Integration Platform for Biomolecular NMR Spectroscopy
Principal investigator: Gryk, Michael
Project start date: Dec. 1, 2008
Project end date: Nov. 30, 2012
Organization: University of Connecticut School of Medicine and Dentistry
NIH institute: NIGMS
FY 2010 funding amount: $296,927


Computer Simulations of Electron Transfer Proteins
Principal investigator: Ichiye, Toshiko
Project start date: Feb. 1, 1992
Project end date: Nov. 30, 2013
Organization: Georgetown University
NIH institute: NIGMS
FY 2010 funding amount: $301,526


Biostatistics/Bioinformatics Core
Principal investigator: Jovanovic, Borko
Budget start date: Feb. 1, 2010
Budget end date: Jan. 31, 2011
Organization: Northwestern University
NIH institute: NCI
FY 2010 funding amount: $193,555


Protein Simulations with a Fast Polarizable Force Field
Principal investigator: Kaminski, George
Project start date: March 1, 2007
Project end date: Feb. 29, 2012
Organization: Worcester Polytechnic Institute
NIH institute: NIGMS
FY 2010 funding amount: $284,848


The MetaCyc and BioCyc Pathway/Genome Databases
Principal investigator: Karp, Peter
Project start date: June 19, 2007
Project end date: April 30, 2011
Organization: SRI International
NIH institute: NIGMS
FY 2010 funding amount: $1,116,499


Bioinformatics and Integrative/Comparative Genomics
Principal investigator: Kohane, Isaac
Budget start date: April 1, 2010
Budget end date: March 31, 2011
Organization: Children's Hospital Boston
NIH institute: NINDS
FY 2010 funding amount: $150,337


Biostatistics & Informatics
Principal investigator: Le, Chap
Budget start date: Feb. 1, 2010
Budget end date: Jan. 31, 2011
Organization: University of Minnesota Twin Cities
NIH institute: NCI
FY 2010 funding amount: $352,222


Methods for Genomic Data with Graphical Structures
Principal investigator: Lee, Hongzhe
Project start date: July 1, 2007
Project end date: April 30, 2011
Organization: University of Pennsylvania
NIH institute: NCI
FY 2010 funding amount: $289,814


Novel Web-Based Tools for Collaborative Community-Driven Genome Feature Annotation
Principal investigator: Lewis, Suzanna
Project start date: August 1, 2007
Project end date: April 30, 2014
Organization: University of California/Lawrence Berkeley Lab
NIH institute: NIGMS
FY 2010 funding amount: $616,989


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Statistical Methods for Correlated and High-Dimensional Biomedical Data
Principal investigator: Lin, Xihong
Project start date: Dec. 15, 1997
Project end date: March 31, 2011
Organization: Harvard University (School of Public Health)
NIH institute: NCI
FY 2010 funding amount: $312,162


High Performance Computing in Computational Biology
Principal investigator: Livesay, Dennis
Project start date: April 1, 2010
Project end date: March 31, 2011
Organization: University of North Carolina Charlotte
NIH institute: NCRR
FY 2010 funding amount: $474,288


The Statistical and Computational Analysis of Flow Cytometry Data
Principal investigator: Lumley, Thomas
Project start date: May 1, 2008
Project end date: April 30, 2012
Organization: Fred Hutchinson Cancer Research Center
NIH institute: NIBIB
FY 2010 funding amount: $338,802


Amber/PBSA: An Open-Source Computer Program for Accurate and Scalable Solvation A[nalysis]
Principal investigator: Luo, Ray
Project start date: May 1, 2010
Project end date: April 30, 2014
Organization: University of California Irvine
NIH institute: NIGMS
FY 2010 funding amount: $263,208


Bioinformatics
Principal investigator: Manning, Gerard
Budget start date: Feb. 1, 2010
Budget end date: Jan. 31, 2011
Organization: Scripps Research Institute
NIH institute: NIA
FY 2010 funding amount: $229,648


Network-Directed Discovery of Disease Genes
Principal investigator: Marcotte, Edward
Project start date: April 1, 2003
Project end date: March 31, 2013
Organization: University of Texas Austin
NIH institute: NIGMS
FY 2010 funding amount: $270,864


Comparative Toxicogenomics Database (CTD)
Principal investigator: Mattingly, Carolyn
Project start date: August 18, 2006
Project end date: April 30, 2011
Organization: Mount Desert Island Biological Lab
NIH institute: NIEHS
FY 2010 funding amount: $196,000


A Gene Expression Brain Atlas of the Zebra Finch
Principal investigator: Mello, Claudio
Project start date: April 1, 2010
Project end date: March 31, 2014
Organization: Oregon Health and Science University
NIH institute: NIGMS
FY 2010 funding amount: $385,000


Acquisition of Computer System for Computational Biology
Principal investigator: Moraru, Ion
Project start date: April 22, 2010
Project end date: April 21, 2011
Organization: University of Connecticut School of Medicine and Dentistry
NIH institute: NCRR
FY 2010 funding amount: $442,314


Adaptive Methodology for Functional Biomedical Data
Principal investigator: Morris, Jeffrey
Project start date: March 1, 2004
Project end date: Feb. 29, 2012
Organization: University of Texas MD Anderson Cancer Center
NIH institute: NCI
FY 2010 funding amount: $254,023


The Scan

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Nucleic Acids Research Papers on Targeting DNA Damage Response, TSMiner, VarSAn

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