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From Parts to Networks

The sequencing of the first human genome provided a "parts list" that needs to be placed into a larger context of how those parts work together, László Barabási from Northeastern University tells NOVA Next.

Barabási and other researchers like Marc Vidal at Dana-Farber Cancer Center and Joseph Loscalzo at Harvard Medical School are looking to make connections between DNA and proteins to see how the parts all fit together and identify what networks are involved in certain diseases.

Barabási says the "diseasome" is like a map of Manhattan in that certain activities tend to cluster like plays on Broadway or trading on Wall Street. They've uncovered, NOVA Next says, some disease modules where genes and proteins involved in a certain disease tend to clump.

"Future medical treatments may not focus on a particular genetic mutation, but rather on the biological routes through which diseases are expressed," NOVA Next adds.

The Scan

Foxtail Millet Pangenome, Graph-Based Reference Genome

Researchers in Nature Genetics described their generation of a foxtail millet pangenome, which they say can help in crop trait improvement.

Protein Length Distribution Consistent Across Species

An analysis in Genome Biology compares the lengths of proteins across more than 2,300 species, finding similar length distributions.

Novel Genetic Loci Linked to Insulin Resistance in New Study

A team reports in Nature Genetics that it used glucose challenge test data to home in on candidate genes involved in GLUT4 expression or trafficking.

RNA Editing in Octopuses Seems to Help Acclimation to Shifts in Water Temperature

A paper in Cell reports that octopuses use RNA editing to help them adjust to different water temperatures.