JGI’s 2009 Community Sequencing Program Marks Shift from Sanger to New Platforms

July 08, 2008

By Julia Karow

For next year’s CSP, which accounts for about half of JGI’s sequencing activities, the institute has selected 44 projects, including genomes of eukaryotes, bacteria, and archaea, as well as metagenomic analyses. More than half of the sequencing data will be generated on Illumina’s Genome Analyzer, about a quarter on 454’s platform, and less than 15 percent by Sanger sequencing.

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Connection Between Epigenome, Selective Mutability, Evolution, and Human Disease
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Genetic Data for Modern Genetic Breeds 'Have Yet to Shed Light on Dog Origins'
Larson, Karlsson et al., PNAS
A team led by researchers at the University of Durham investigate the value of modern genetic data to elucidate the origins of dog domestication by analyzing 49,024 autosomal SNPs in 19 wolves and 1,375 dogs, representing 35 breeds. The team reports having uncovered conflicting evidence when correlating the earliest archeological dogs with the geographic locations of 14 breeds thought to be ancient. "These genetically distinct ancient breeds only appear so because of their relative isolation, suggesting that studies of modern breeds have yet to shed light on dog origins," the authors write.
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JGI’s 2009 Community Sequencing Program Marks Shift from Sanger to New Platforms

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