Chromosome-Scale Selective Sweeps and Genomic Diversity in C. elegans
Andersen, Gerke et al., Nature Genetics
Researchers at Princeton University and elsewhere discuss the effects of chromosome-scale selective sweeps on genomic diversity in Caenorhabditis elegans. Taking a high-throughput selective sequencing approach on a collection of 200 wild C. elegans strains, the team found that the nematode's "genome variation is dominated by a set of commonly shared haplotypes on four of its six chromosomes, each spanning many megabases." Further, the team reports on its population genetic modeling experiments, which showed that "this pattern was generated by chromosome-scale selective sweeps that have reduced variation worldwide; at least one of these sweeps probably occurred in the last few hundred years," it writes.
Baylor Researcher Wins $500K NHGRI Grant to Develop Improved SBS Instrument
The researcher, Mike Metzker, has been developing a reversible terminator chemistry for SBS sequencing. Eventually he wants his startup company, LaserGen, to wrap this chemistry and an imaging technology he developed into a sequencing instrument.
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