A Concussion Signature

Researchers led by Linda Papa at Orlando Regional Medical Center in Florida report that proteins released from the brain due to a concussion may be detected in the blood, according to Postmedia News. Papa and her colleagues examined the serum levels of ubiquitin C-terminal hydrolase in 295 people with mild and moderate traumatic brain injury and in 199 controls, both injured and uninjured. In The Journal of Trauma and Acute Care Surgery, Papa and her colleagues report that "UCH-L1 is detectable in serum within an hour of injury and is associated with measures of injury severity."

"The key is, could these proteins tell us in advance how severe the head injury is, and is this patient going to require some kind of neurosurgery?" Papa tells Postmedia News. "There's really no approved blood test for the brain as we know it right now." She adds that such a test could be possible within five years.

This Week in Clinical Chemistry

Researchers led by Xavier Correig from the Universitat Rovira i Virgili in Tarragona, Spain, report in Clinical Chemistry that there is metabolic heterogeneity in polycystic ovary syndrome. Using a GC-MS-based metabolomics approach, the researchers examined plasma samples from 36 women with PCOS and 39 women without it. The cases and controls were matched for age, body mass index, and obesity. The researchers found that PCOS patients were, as compared to controls, hyperinsulinemic and insulin resistant. Obese PCOS patients also had higher levels of long-chain fatty acids and glycerol in their plasma, while non-obese patients with PCOS "showed a metabolic profile consisting of suppression of lipolysis and increased glucose utilization," the researchers report. The further conclude: "Our results indicate substantial metabolic heterogeneity in PCOS, suggesting that insulin resistance and hyperinsulinemia contribute to the pathogenesis of this disorder, but that the latter is not necessarily secondary to the former."

Also in Clinical Chemistry, the University College London Institute of Child Health's Lyn Chitty and colleagues describe their use of digital PCR to detect sickle cell anemia in fetuses from cell-free fetal DNA in maternal plasma. They report that their relative mutation dosage-based approach could correctly identify sickle cell genotype in 82 percent of male fetuses and 75 percent of female fetuses. "We have extended the use of RMD for single-gene disorders to include the prenatal diagnosis of sickle cell anemia, and, for the first time, we have applied this approach to the detection of an autosomal recessive disease in female fetuses," Chitty and her colleagues write.

A Vote for Device Tax Repeal

The US House of Representatives approved a bill yesterday to repeal the tax on medical devices imposed by the Affordable Care Act, reports Politico. The vote passed 270 to 146. Politico notes that the bill is unlikely to come to a vote in the Democrat-controlled Senate and that it is likely to be vetoed should it get to the president's desk. Republicans say that the tax will stifle innovation and lead to job losses. "We have a chance and an opportunity to stop this tax dead in its tracks," says Representative Erik Paulsen (R-Minn.), who sponsored the bill, to Politico.

The bill makes up for the loss of the $29 billion the tax would bring in by "requiring low- to middle-income individuals who buy subsidized coverage in the Affordable Care Act's health exchanges to pay back the full amount of any overpayments they may receive," Politico says.

Some Democrats voiced their dislike of the tax, but said they liked the pay-for even less. "This is not a tax that I like. As a matter of fact, I don't like this tax at all," Representative Mike Thompson (D-Calif.) said on the chamber floor, according to Mass Device, adding "I'd vote to repeal this provision today, yesterday or tomorrow if we were having a provision with a serious discussion about the pay-for. Instead, we're repealing a tax on an industry that had over $40 billion in profits in 2010, and we're paying for it on the backs of middle-class people."

The Sample's sister publication GenomeWeb Daily News has more on the vote here.

This Week in the Journal of Molecular Diagnostics

Researchers in Germany present a dual-color ERG break-apart assay that uses both chromogenic in situ hybridization and silver in situ hybridization in the Journal of Molecular Diagnostics. They compared their approach to detecting the TMPRSS2-ERG fusion gene with fluorescence in situ hybridization. "Our findings demonstrate that the ERG rearrangement status can reliably be assessed by CS-ISH," the researchers write. "Further, the CS-ISH technique combines the accuracy and precision of FISH with the ease of bright-field microscopy."

Also in the Journal of Molecular Diagnostics, researchers at the University of Texas MD Anderson Cancer Center introduce their high-resolution melting-based method to identify DNA methyltransferase 3A mutations in acute myeloid leukemia patients. With this approach, the researchers examined 104 AML patients for mutations in exons 8 through 10 and 15 through 23, which encode the proline-tryptophan-tryptophan-proline, ATR-DNMT3-DNMT3L zinc finger, and MTase domains of DNMT3A and compared it to Sanger sequencing. "On the whole, the 0% false-negative and relatively low false-positive rates make HRM a very reliable screening method for DNMT3A mutations and drastically decreases the number of samples requiring direct sequencing," they write.

'Jobs and Innovation'

The US Patient Protection and Affordable Care Act includes a provision that is set to go into effect at the beginning of 2013 for a 2.3 percent tax to be levied on medical device companies. The tax is not without its critics, and at the Hill's Congress Blog, Representative Erik Paulsen (R-Minn.) and Jason Altmire (D-Penn.) write that it will lead to a decrease in jobs and innovation. "After touring many device companies, both large and small, we know that this impending tax may force companies to cut jobs, reduce investment in R&D, move overseas, or even shut down completely," Paulsen and Altmire write. Additionally, they say that the tax will affect small companies the most as the tax is on the companies' revenue, not profit. The duo is bringing forward legislation to repeal the tax.

This Week in Experimental and Molecular Pathology

Researchers at the University of Belgrade in Serbia examined genomic instability and p53 changes in anaplastic astrocytoma and primary glioblastoma patients. As they report in Experimental and Molecular Pathology, they used arbitrarily primed PCR to detect both chromosomal instability and the accumulation of mutations in tumors and found that about 40 percent of tumors had p53 alterations while 63 percent had high levels of genomic instability. "Our results, although limited by a relatively small set of samples, suggest that high overall level of genomic instability is one of the main features of anaplastic astrocytomas and primary glioblastomas. Alterations of p53, although frequently present, did not show any association with the level of genomic instability, but were associated with anaplastic astrocytomas," the researchers write.

Also in Experimental and Molecular Pathology, researchers led by Devendra Agrawal from the Creighton University School of Medicine write that high levels of vitamin D receptors in mucosa of people with Barrett's Esophagus "may indicate an increased sensitivity of this tissue to endogenous or therapeutic effects of Vitamin D."

The House Passes FDA User Fee Bill

The US House of Representatives passed the FDA user fee bill last week with a vote of 387 to 5, reports MedPage Today. The Senate passed its own version of the bill in May. The bill reauthorizes the Medical Device User Fee Act that allows FDA to collect fees from companies to help pay for the review of medical devices. Representative Joe Pitts (R-Penn.) tells MassDevice that the user fee reauthorization act is "much better, I think we've got some real good reforms," and that "frankly, we talked to industry and a got a lot of our cues from them." MedPage Today adds that lawmakers plan to send the final version of the bill to President Barack Obama by July 4.

This Week in the Journal of Clinical Pathology

Researchers in London report in the Journal of Clinical Pathology that expression of Ki-67, a protein that is present during active phases of the cell cycle, is a moderate marker for human papillomavirus infection in penile squamous cell carcinoma. The researchers examined 148 formalin-fixed, paraffin-embedded penile squamous cell carcinoma samples for Ki-67 expression and presence of HPV. They found that Ki-67 was strongly expressed in nearly 40 percent of the samples and that Ki-67 expression was "positively correlated with high-risk HPV," and with tumor grade. "High Ki-67 immunoexpression could be an indicator, but not a definitive predictor of high-risk HPV infection in PSCC," the researchers write, adding that expression does not correlate with lymph node metastasis, cancer-specific survival, or overall survival.

Also in the Journal of Clinical Pathology, researchers led by the University of Vienna's Sebastian Schoppmann write that the human homolog of CUL-4, which is important in DNA replication in Caenorhabditis elegans, is associated with the development and progression of ovarian carcinoma. CUL-4 is known to interact with cell cycle regulators like p53 and p21. The researchers studied CUL-4, p53, and p21 protein expression in 140 human epithelial ovarian tumor samples, and found that CUL-4 overexpression is associated with overall and disease-free survival in invasive carcinoma. "Our results show that CUL-4 is associated with the malignant potential of ovarian tumors. It might also play a relevant role in the progression of ovarian carcinoma, warranting further investigations," the researchers write, adding that "interestingly, no association of CUL-4 with p53 and p21 expression was found."

Added to the Lineup

Quest Diagnostics has a new molecular test panel to help doctors differentiate between cancerous and non-cancerous thyroid glands, the company says in a statement. The panel tests for mutations in BRAF, RAS, RET/PTC, and PAX8/PPAR gamma, which are linked to papillary and follicular thyroid cancer. "We believe our molecular panel will enhance the reliability of thyroid biopsy testing, helping to prevent the unnecessary removal of healthy thyroids for many patients," says Quest Diagnostics' Richard Reitz.

"The launch of the thyroid test comes on the heels of four new test panels introduced last month for congenital adrenal hyperplasia, an endocrine disorder mostly found in newborns, children, and women," notes Zacks Equity Research.

This Week in Modern Pathology

Researchers from University Hospital Zurich report their 10-year follow-up study on diagnostic errors in Modern Pathology. The researchers previously examined diagnostic errors between 1972 and 1992, and for this study, they looked at differences between clinical diagnoses and those made at autopsy for 100 patients who died at a teaching hospital in Switzerland in 2002. They found that during the last 30 years, major diagnostic errors declined from 30 percent to 7 percent while sensitivity for diagnosing cardiovascular, infectious, and neoplastic diseases increased, and specificity for diagnosing cardiovascular diseases increased. Additionally, the researchers note that the number of diagnostic procedures performed have increased over the years. "The frequency of major diagnostic errors has been further reduced at the beginning of the new millennium probably due in large part to new diagnostic tools," they write.

Thomas Wiesner from the Medical University of Graz in Austria and his colleagues report evidence in Modern Pathology for a morphological variant of superficial spreading melanoma, which they call 'melanomas composed exclusively or predominantly of large nests,' or MLNs. The researchers histologically and genetically characterized 11 MLNs, finding that they have a "predominant arrangement of melanocytes in very large nests" that conventional superficial spreading melanoma lacks, and that "all of the tumors in this study showed multiple gains and losses of several chromosomes," similar to conventional superficial spreading melanoma.

This Week in Clinical Chemistry

Researchers from the University Medical Center Utrecht in The Netherlands present their assessment of three fecal biomarker tests that differentiate between organic bowel disease and non-organic bowel disease in Clinical Chemistry. The researchers, led by Utrecht's Niek de Wit, applied the point-of-care tests — Bühlmann Laboratories' Quantum Blue calprotectin quantitative lateral flow assay and its EK-CAL calprotectin ELISA and Inverness Medical Innovations' Clearview One Step Fecal Occult Blood Test Device, which is an immunochemical test — to 386 patients thought to have organic bowel disease. "The diagnostic accuracy of the tests alone or in combination was insufficient for clinical utility when all adenomas were considered to be OBD," de Wit and colleagues write. "When only advanced adenomas ([greater than] 1 cm, more likely to bleed and be symptomatic) were considered OBD [organic bowel disease], however, all tests showed improved diagnostic accuracy." The authors add that these tests may help distinguish organic bowel disease from non-organic bowel disease when used in conjunction with other scoring systems.

A related editorial from the University of Dundee's Callum Fraser and colleagues urges laboratory professionals to "encourage current users of [guaiac-based fecal occult blood tests] in laboratories, clinics, wards, and primary care to replace these tests with the more effective" fecal immunochemical tests for hemoglobin. Additionally, Fraser et al. say that lab workers are ideally placed to help with the standardization of methods used in fecal immunochemical tests for hemoglobin.

Also in Clinical Chemistry, Qiwei Guo, Li Xiao, and Yulin Zhou from the Maternal and Child Health Hospital in Xiamen, China, report on their method to detect aneuploidies, called high-resolution melting analysis of segmental duplications. The team's approach first uses a single primer set to amplify regions from different chromosomes that are then analyzed using high-resolution melting analysis. Guo et al. applied this method to samples with different trisomies as well as to controls. "This novel method clearly differentiates samples of patients with common aneuploidies from those of unaffected controls, while markedly simplifying the assays and reducing time and costs," the researchers write.

LabCorp to Acquire Medtox

Laboratory Corporation of America is acquiring Medtox Scientific for about $241 million, says a press release from the companies. Medtox offers clinical laboratory services including toxicology testing and bio-analytical testing for clinical trials, among other things. "This transaction highlights the fundamental value of the Medtox brand, the talent and expertise of our team and the quality of our products and testing services," says Dick Braun, the company's chairman and CEO. "As part of LabCorp with its substantial resources and infrastructure, we expect to accelerate Medtox's profitable growth and provide a stable and sustainable environment for our employees and clients."

Risk Test

Molecular diagnostics company Agendia today launched its ColoPrint test to predict risk of colon cancer recurrence. The microarray-based test looks at the expression of 18 genes associated with colon cancer recurrence and metastasis, says a release from the company. "ColoPrint's definitive results (either high or low risk with no in between) will enable doctors to choose treatment plans for colon cancer patients that are customized for each patient's individual needs," says Agendia's CEO David Macdonald in a statement. The company also offers MammaPrint, a test that predicts risk of breast cancer recurrence.