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Wednesday, June 19, 2013
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GenomeWeb Daily News

  • GenomeWeb Feature: 11th Annual Salary Survey
  • LGC Genomics, Covaris Partner on DNA Extraction from FFPE
  • New $75M Washington University Lab to House Genomics Center, Genetics Department
  • Sanofi, Curie Institute Using Sequencing Technologies on Ovarian Cancer Collaboration
  • Nuclea Biotech, Berkshire Medical Center Collaborate on Prostate, Breast Cancer Biomarker Identification
See more headlines

BioArray News

  • NMTC's 'Italian Soap Opera' Leaves Luminex Crowing 'Nice Win' While GenMark Cuts Guidance
  • Arrays Increasingly Adopted for Stillbirth Studies, though Questions about Cost, Counseling Remain
  • BlueGnome, Expanding Cyto Menu, Debuts High-Resolution, 850K SNP Chip on Illumina Platform
See all

BioInform

  • Computational Arm of Thomas Jefferson University Launches NGS Data-Analysis Service
  • SAP, TUM Launch Free Proteomics Resource to Support Drug and Disease Research
  • UMB Team to Use $410K NIAID Grant to Build Microbial Detection Pipeline for NGS-based Dx
See all

Clinical Sequencing News

  • GATC Biotech Launches One-Week Diagnostic Exome, but Clinical Interpretation is Pending
  • University of Cologne Combines AmpliSeq, MiSeq for Cancer Dx; Looks to Validate Qiagen Panels
  • Life Tech Adds to Clinical NGS Partnerships With University of Buffalo, Empire Genomics Deal
See all

Gene Silencing News

  • Plant Biotech Firm Venganza Secures US Patent on RNAi Technology
  • New Research Links Two microRNAs to Ovulation
  • Monsanto Forms Honey Bee Advisory Council
See all

In Sequence

  • Cambridge Team Demos DNA Origami Nanopores; Oxford Nanopore Licenses Technology
  • Floragenex Aims to Expand Customer Base as It Carves out Niche with RAD-seq Services
  • Capture Technique Enables Gene Comparisons Across Divergent Species
See all

PCR Insider

  • IP Watch: Canon, NuGen, Qiagen, EliTech, Polyplus Transfection, Others Win US Patents
  • Hologic Women's Health Deal with Quest Viewed as Loss for Qiagen, Particularly on HPV Front
  • Life Tech Commercializes Low-cost Digital PCR System; Stem Cell Characterization Assay
See all

Pharmacogenomics Reporter

  • In Gene Patent Ruling, SCOTUS Draws Line Between Product of Nature and Invention
  • Innovation Boom or Bust? Industry Gauges Impact of SCOTUS Ruling on Gene Patents
  • With New BRCA Testing Options, Patient Groups Advise Women to Speak to Genetics Expert, Share Reports
See all

ProteoMonitor

  • Triple Quads Take the Stage at ASMS 2013 as Vendors Continue Piecing Together Clinical MS Platforms
  • Thermo Releases New Fusion Mass Spec, Combining Quadrupole, Ion Trap, and Orbitrap in One Instrument
  • Proteome Sciences Inks Deal with Thermo Exchanging TMT IP for Cash, Aid in SysQuant Clinical Work
See all
  • Most Viewed
  • Most Emailed
  • Blog
  1. GenomeWeb Daily News
    White House Open Science 'Champions' Highlights Genomic Data Pioneers
  2. In Sequence
    Cambridge Team Demos DNA Origami Nanopores; Oxford Nanopore Licenses Technology
  3. GenomeWeb Daily News
    New $75M Washington University Lab to House Genomics Center, Genetics Department
  4. GenomeWeb Daily News
    UPDATE: Agilent to Offer Senior Notes; Fitch Rates Offering BBB+
  5. GenomeWeb Daily News
    Cincinnati Environmental Genetics Center Lands $9M Grant
  1. GenomeWeb Daily News
    White House Open Science 'Champions' Highlights Genomic Data Pioneers
  2. GenomeWeb Daily News
    GenomeWeb Feature: 11th Annual Salary Survey
  3. GenomeWeb Daily News
    New $75M Washington University Lab to House Genomics Center, Genetics Department
  4. GenomeWeb Daily News
    Oxford Nanopore Disputes Comments by Illumina CEO
  5. GenomeWeb Daily News
    UCSC Designing Social Network-type Model for Analyzing Cancer Data
  1. The Daily Scan
    Prince William's DNA
  2. The Daily Scan
    Bill Nye, Famous Guy
  3. The Daily Scan
    Coming Soon
  4. The Daily Scan
    NCATS Turns to Crowdsourcing
  5. Careers
    Who's an Author?
  • GenomeWebinars


    Advances in Single-Cell Genomics: Live Cell RNA and Circulating miRNA Detection

    Sponsor: EMD Millipore

    Data presented in this webinar illustrates the value of live cell analysis at the single-cell level to identify differences in expression levels across populations of cells. The cells remain intact for downstream analysis. Our experts also discuss the use of SmartFlare RNA detection probes for the direct quantification of circulating miRNAs with rapid processing of blood plasma/serum, which is done without the use of enzymes. Using circulating miRNAs with established roles in cancer and quality control, we can accurately detect these miRNAs in plasma using a microplate fluorometer within an hour after plasma preparation.

    On-demand recording is available here.

    Optimization of NGS Library Preparation: Low Inputs and Fast, Streamlined Workflows

    Sponsor: New England Biolabs

    Library preparation methods continue to be challenged by the requirement for faster and more efficient protocols, using lower input amounts. In this online seminar, recorded Feb. 7, 2013, experts discuss new approaches to tackle these challenges, particularly for bacterial and exome sequencing.

    Available here.

  • Young Investigator Profile

    Bernd Bodenmiller

    Group Leader
    University of Zurich

    Single-Cell Proteomics

    University of Zurich researcher Bernd Bodenmiller studies single-cell signaling with a technology almost as newly minted as his lab.

    Bodenmiller launched his lab in February, and three months later, in May, he installed the instrument that has become key to his work — DVS Sciences' CyTOF mass cytometer, a new take on flow cytometry that lets scientists measure dozens of targets at once in single cells.

    During his PhD work, Bodenmiller focused on the analysis of protein phosphorylation and cellular signaling. As he was wrapping up his thesis, though, he says he realized that "if you want to study signaling in disease, then you need the ability to study signaling on a single-cell level."

  • Blog

    Prince William's DNA

    A British noble's ancestry claim poses unique DNA privacy question.

    NCATS Turns to Crowdsourcing

    Nine research teams will pursue new uses for shelved pharma compounds.

    Bill Nye, Famous Guy

    The New York Times profiles the 'Science Guy.'

    Coming Soon

    Labs get ready to offer BRCA testing.

  • Papers of Note

    Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us
    El Baidouri, Diancourt, et al. PLOS Neglected Tropical Diseases

    Through a multilocus sequence analysis of 222 African and Eurasian Leishmania isolates, French researchers identified seven genetic clusters of Leishmania in the regions tested. For the most part, those clusters corresponded to existing Leishmania classification schemes, the study authors note, though their analysis suggests genetic distinctions are somewhat hazier for three Leishmania species implicated in visceral forms of leishmaniasis. "Although these taxa cause specific clinical forms of the disease and are maintained through different parasitic cycles," they say, "they are not clearly distinct and form a continuum, in line with the concept of species complex already suggested for this group thirty years ago."

    Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna
    Nakamura, Mori, et al. Proceedings of the National Academy of Sciences

    AJapanese team describes findings from a genome sequencing study focused on the Pacific bluefin tuna, Thunnus orientalis. An analysis of the genome revealed more than 26,400 predicted protein-coding genes, including genes coding for rhodopsin and opsin pigments poised to pick up blue, green, red, and UV light. Within genes coding for the color-sensing proteins, researchers found substitutions and duplications suspected of helping bluefish tuna differentiate between blue and green. If so, that could confer an evolutionary advantage in the fish's ocean environment, they say, perhaps explaining some aspects of the tuna's predatory proficiency.

  • People on the Move

    Direct-to-consumer genetic testing firm 23andMe has appointed Andy Page as its president, a newly created post. Page, who has served as a member of 23andMe's board of directors for the past year, will report to CEO and co-founder Anne Wojcicki. He was previously president of the Gilt Groupe, an online luxury shopping website, and chief operating and financial officer at PlayPhone.


    The Ludwig Institute for Cancer Research has appointed David Lane to be its new scientific director, effective June 1. He succeeds Andrew Simpson, who was scientific director for five years, from 2007 to 2012. Lane is chief scientist at Singapore's Agency for Science, Technology, and Research, and he will retain that post in addition to his new role at Ludwig.


    Kevin Hrusovsky is resigning his post at PerkinElmer as senior VP and president of the Life Science and Technology division. Hrusovsky will serve as a consultant to the company for up to one year, beginning in June. He joined PerkinElmer through the company's acquisition of Caliper Life Sciences, where he was CEO and president.

  • Upcoming Events

    Conferences, Meetings & Deadlines

    International Meeting on Cell-Free DNA
    June 20-21 / Copenhagen
    Copenhagen University Hospital

    Intelligent Systems for Molecular Biology
    July 21-23 / Berlin
    International Society for Computational Biology

    2013 AACC Annual Meeting
    July 28-August 1 / Houston
    American Association for Clinical Chemistry

    NGS for Drug Developers
    July 31-August 2 / Boston
    Wyss Institute

    Cancer Cytogenomics Microarray Consortium meeting
    August 5-7 / Chicago
    Cancer Cytogenomics Microarray Consortium

    Abstract & Registration Deadlines
    more
  • Science

    An international research team has uncovered unexpected genetic diversity in the miniscule marine algae Emiliania huxleyi, a species now known to have the type of variable 'pan genome' previously described in some bacterial species. They detected an array of genes and repetitive sequences that are present in some E. huxleyi strains but not in others, varying with each strain's habitat, physical features, and metabolic capabilities, among others.
  • Business

    The US Supreme Court unanimously ruled that human genes are not patentable, but synthetic DNA, or cDNA, is patent eligible because it does not occur naturally. Its decision had broad implications for the biotech industry and for Myriad Genetics, in particular, whose patents on the BRCA1 and BRCA2 genes were at the center of the case. The ruling runs counter to the US Patent and Trademark Office's policy of granting patents on isolated gene sequences.
  • Funding

    The US investment in the Human Genome Project and the ensuing federal funding for genome science has reaped massive economic benefits, according to a new study from Battelle. It found that genomics-related fields from biomedicine to energy and agriculture have had a $965 billion impact on the US economy, stemming from a total of $14.5 billion in federal investments between 1988 and 2012. Genomics-related funding has yielded a $65 return on every $1 invested.
  • GenomeWebinars

    GenomeWebinar: Advances in Single-Cell Genomics: Live Cell RNA and Circulating miRNA Detection

    Sponsor: EMD Millipore

    GenomeWeb and EMD Millipore invite you to view an archived webinar discussing new approaches to detect RNA at the single-cell level as well as new probes for the direct quantification of circulating miRNAs. In this free online seminar, recorded April 25, 2013, our expert panel shares protocols for improved RNA and miRNA detection.

    On-demand recording available here.

TechGuides Listings

  • Genome Technology Digital Editions Archive
  • Tech Guide Archives

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