Q&A: Genome Institute of Singapore's Edison Liu on the Future of HUGO, GWAS, and GIS

March 16, 2010

Re-elected last month as president of the Human Genome Organization, GIS Executive Director Edison Liu sees HUGO as a vehicle to cement the role of developing Asian countries in genomics. He also sees it as a means to broker deals between West and East that foster the application of genomics in medicine and spur economic growth.

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Papers of Note

Human Genetic Variation Alters Anthrax Toxin Sensitivity
Martchenko, Candille et al., PNAS
Researchers at Stanford University School of Medicine show that genetic variation affecting capillary morphogenesis gene 2, or CMG2, dramatically alters toxin sensitivity in humans. In its analysis, the team reports on "a CMG2 single-nucleotide polymorphism occurring frequently in African and European populations [that they found] independently altered toxin uptake." The group goes on to suggest "testing of genomically characterized human cell populations may offer a broadly useful strategy for elucidating effects of genetic variation on infectious disease susceptibility."

Genomic Epidemiology of the 2011 Escherichia coli O104:H4 Outbreaks
Grad, Lipsitch et al., PNAS
An international team led by investigators at Brigham and Women's Hospital in Boston reports on the genomic epidemiology of the 2011 Escherichia coli O104:H4 outbreaks in Europe, saying that the "striking difference in diversity between the German and French outbreak samples" it observed "is consistent with several hypotheses, including a bottleneck that purged diversity in the German isolates, variation in mutation rates in the two E. coli outbreak populations, or uneven distribution of diversity in the seed populations that led to each outbreak."
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Life Technologies this week named Alan Sachs as head of global research and development and Ronnie Andrews as president of medical sciences.

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Andrews joins Life Tech from GE Molecular Diagnostics, where he served as a segment leader following GE's 2010 acquisition of Clarient, where Andrews was CEO. Andrews has also held executive positions with Abbott Diagnostics, Roche Diagnostics, and Immucor.

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Feb 19-23 / San Francisco
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Members of the International Stroke Genetics Consortium and the Wellcome Trust Case Control Consortium 2 did a GWAS involving thousands of individuals of European descent with or without a history of stroke and found a new genetic variant that contributes to a form of stroke called large vessel ischemic stroke. The variant was found in in the histone deacetylase 9 coding gene HDAC9 on chromosome 7.
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Funding
Canada launched a new program that will pump C$67.5 million (US$67.3 million) into projects that will use genomics-based research to advance personalized healthcare. The 2012 Large-Scale Applied Research Project Competition in Genomics and Personalized Health is funded with C$40 million from Genome Canada, C$22.5 million from the Canadian Institute of Health Research, and C$5 million from the Cancer Stem Cell Consortium.
Genome Technology Magazine
With academic hiring having nearly come to a halt, life scientists increasingly find themselves searching for careers beyond the ivory tower. This month, GT presents a global snapshot of where the genomics jobs are outside of academia, and an insiders' look into how to land them.

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Q&A: Genome Institute of Singapore's Edison Liu on the Future of HUGO, GWAS, and GIS

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